Tasks and Parallel Computing
Tasks
Core.Task
— Type.Task(func)
Create a Task
(i.e. coroutine) to execute the given function (which must be callable with no arguments). The task exits when this function returns.
Example
julia> a() = det(rand(1000, 1000));
julia> b = Task(a);
In this example, b
is a runnable Task
that hasn't started yet.
Base.current_task
— Function.current_task()
Get the currently running Task
.
Base.istaskdone
— Function.istaskdone(t::Task) -> Bool
Determine whether a task has exited.
julia> a2() = det(rand(1000, 1000));
julia> b = Task(a2);
julia> istaskdone(b)
false
julia> schedule(b);
julia> yield();
julia> istaskdone(b)
true
Base.istaskstarted
— Function.istaskstarted(t::Task) -> Bool
Determine whether a task has started executing.
julia> a3() = det(rand(1000, 1000));
julia> b = Task(a3);
julia> istaskstarted(b)
false
Base.yield
— Function.yield()
Switch to the scheduler to allow another scheduled task to run. A task that calls this function is still runnable, and will be restarted immediately if there are no other runnable tasks.
yield(t::Task, arg = nothing)
A fast, unfair-scheduling version of schedule(t, arg); yield()
which immediately yields to t
before calling the scheduler.
Base.yieldto
— Function.yieldto(t::Task, arg = nothing)
Switch to the given task. The first time a task is switched to, the task's function is called with no arguments. On subsequent switches, arg
is returned from the task's last call to yieldto
. This is a low-level call that only switches tasks, not considering states or scheduling in any way. Its use is discouraged.
Base.task_local_storage
— Method.task_local_storage(key)
Look up the value of a key in the current task's task-local storage.
Base.task_local_storage
— Method.task_local_storage(key, value)
Assign a value to a key in the current task's task-local storage.
Base.task_local_storage
— Method.task_local_storage(body, key, value)
Call the function body
with a modified task-local storage, in which value
is assigned to key
; the previous value of key
, or lack thereof, is restored afterwards. Useful for emulating dynamic scoping.
Base.Condition
— Type.Condition()
Create an edge-triggered event source that tasks can wait for. Tasks that call wait
on a Condition
are suspended and queued. Tasks are woken up when notify
is later called on the Condition
. Edge triggering means that only tasks waiting at the time notify
is called can be woken up. For level-triggered notifications, you must keep extra state to keep track of whether a notification has happened. The Channel
type does this, and so can be used for level-triggered events.
Base.notify
— Function.notify(condition, val=nothing; all=true, error=false)
Wake up tasks waiting for a condition, passing them val
. If all
is true
(the default), all waiting tasks are woken, otherwise only one is. If error
is true
, the passed value is raised as an exception in the woken tasks.
Returns the count of tasks woken up. Returns 0 if no tasks are waiting on condition
.
Base.schedule
— Function.schedule(t::Task, [val]; error=false)
Add a Task
to the scheduler's queue. This causes the task to run constantly when the system is otherwise idle, unless the task performs a blocking operation such as wait
.
If a second argument val
is provided, it will be passed to the task (via the return value of yieldto
) when it runs again. If error
is true
, the value is raised as an exception in the woken task.
julia> a5() = det(rand(1000, 1000));
julia> b = Task(a5);
julia> istaskstarted(b)
false
julia> schedule(b);
julia> yield();
julia> istaskstarted(b)
true
julia> istaskdone(b)
true
Base.@schedule
— Macro.@schedule
Wrap an expression in a Task
and add it to the local machine's scheduler queue. Similar to @async
except that an enclosing @sync
does NOT wait for tasks started with an @schedule
.
Base.@task
— Macro.@task
Wrap an expression in a Task
without executing it, and return the Task
. This only creates a task, and does not run it.
julia> a1() = det(rand(1000, 1000));
julia> b = @task a1();
julia> istaskstarted(b)
false
julia> schedule(b);
julia> yield();
julia> istaskdone(b)
true
Base.sleep
— Function.sleep(seconds)
Block the current task for a specified number of seconds. The minimum sleep time is 1 millisecond or input of 0.001
.
Base.Channel
— Type.Channel{T}(sz::Int)
Constructs a Channel
with an internal buffer that can hold a maximum of sz
objects of type T
. put!
calls on a full channel block until an object is removed with take!
.
Channel(0)
constructs an unbuffered channel. put!
blocks until a matching take!
is called. And vice-versa.
Other constructors:
Channel(Inf)
: equivalent toChannel{Any}(typemax(Int))
Channel(sz)
: equivalent toChannel{Any}(sz)
Base.put!
— Method.put!(c::Channel, v)
Appends an item v
to the channel c
. Blocks if the channel is full.
For unbuffered channels, blocks until a take!
is performed by a different task.
Base.take!
— Method.take!(c::Channel)
Removes and returns a value from a Channel
. Blocks until data is available.
For unbuffered channels, blocks until a put!
is performed by a different task.
Base.isready
— Method.isready(c::Channel)
Determine whether a Channel
has a value stored to it. Returns immediately, does not block.
For unbuffered channels returns true
if there are tasks waiting on a put!
.
Base.fetch
— Method.fetch(c::Channel)
Waits for and gets the first available item from the channel. Does not remove the item. fetch
is unsupported on an unbuffered (0-size) channel.
Base.close
— Method.close(c::Channel)
Closes a channel. An exception is thrown by:
Base.bind
— Method.bind(chnl::Channel, task::Task)
Associates the lifetime of chnl
with a task. Channel chnl
is automatically closed when the task terminates. Any uncaught exception in the task is propagated to all waiters on chnl
.
The chnl
object can be explicitly closed independent of task termination. Terminating tasks have no effect on already closed Channel objects.
When a channel is bound to multiple tasks, the first task to terminate will close the channel. When multiple channels are bound to the same task, termination of the task will close all of the bound channels.
julia> c = Channel(0);
julia> task = @schedule foreach(i->put!(c, i), 1:4);
julia> bind(c,task);
julia> for i in c
@show i
end;
i = 1
i = 2
i = 3
i = 4
julia> isopen(c)
false
julia> c = Channel(0);
julia> task = @schedule (put!(c,1);error("foo"));
julia> bind(c,task);
julia> take!(c)
1
julia> put!(c,1);
ERROR: foo
Stacktrace:
[1] check_channel_state(::Channel{Any}) at ./channels.jl:131
[2] put!(::Channel{Any}, ::Int64) at ./channels.jl:261
Base.asyncmap
— Function.asyncmap(f, c...; ntasks=0, batch_size=nothing)
Uses multiple concurrent tasks to map f
over a collection (or multiple equal length collections). For multiple collection arguments, f
is applied elementwise.
ntasks
specifies the number of tasks to run concurrently. Depending on the length of the collections, if ntasks
is unspecified, up to 100 tasks will be used for concurrent mapping.
ntasks
can also be specified as a zero-arg function. In this case, the number of tasks to run in parallel is checked before processing every element and a new task started if the value of ntasks_func()
is less than the current number of tasks.
If batch_size
is specified, the collection is processed in batch mode. f
must then be a function that must accept a Vector
of argument tuples and must return a vector of results. The input vector will have a length of batch_size
or less.
The following examples highlight execution in different tasks by returning the object_id
of the tasks in which the mapping function is executed.
First, with ntasks
undefined, each element is processed in a different task.
julia> tskoid() = object_id(current_task());
julia> asyncmap(x->tskoid(), 1:5)
5-element Array{UInt64,1}:
0x6e15e66c75c75853
0x440f8819a1baa682
0x9fb3eeadd0c83985
0xebd3e35fe90d4050
0x29efc93edce2b961
julia> length(unique(asyncmap(x->tskoid(), 1:5)))
5
With ntasks=2
all elements are processed in 2 tasks.
julia> asyncmap(x->tskoid(), 1:5; ntasks=2)
5-element Array{UInt64,1}:
0x027ab1680df7ae94
0xa23d2f80cd7cf157
0x027ab1680df7ae94
0xa23d2f80cd7cf157
0x027ab1680df7ae94
julia> length(unique(asyncmap(x->tskoid(), 1:5; ntasks=2)))
2
With batch_size
defined, the mapping function needs to be changed to accept an array of argument tuples and return an array of results. map
is used in the modified mapping function to achieve this.
julia> batch_func(input) = map(x->string("args_tuple: ", x, ", element_val: ", x[1], ", task: ", tskoid()), input)
batch_func (generic function with 1 method)
julia> asyncmap(batch_func, 1:5; ntasks=2, batch_size=2)
5-element Array{String,1}:
"args_tuple: (1,), element_val: 1, task: 9118321258196414413"
"args_tuple: (2,), element_val: 2, task: 4904288162898683522"
"args_tuple: (3,), element_val: 3, task: 9118321258196414413"
"args_tuple: (4,), element_val: 4, task: 4904288162898683522"
"args_tuple: (5,), element_val: 5, task: 9118321258196414413"
Currently, all tasks in Julia are executed in a single OS thread co-operatively. Consequently, ayncmap
is beneficial only when the mapping function involves any I/O - disk, network, remote worker invocation, etc.
Base.asyncmap!
— Function.asyncmap!(f, results, c...; ntasks=0, batch_size=nothing)
Like asyncmap()
, but stores output in results
rather than returning a collection.
General Parallel Computing Support
Base.Distributed.addprocs
— Function.addprocs(manager::ClusterManager; kwargs...) -> List of process identifiers
Launches worker processes via the specified cluster manager.
For example, Beowulf clusters are supported via a custom cluster manager implemented in the package ClusterManagers.jl
.
The number of seconds a newly launched worker waits for connection establishment from the master can be specified via variable JULIA_WORKER_TIMEOUT
in the worker process's environment. Relevant only when using TCP/IP as transport.
addprocs(machines; tunnel=false, sshflags=``, max_parallel=10, kwargs...) -> List of process identifiers
Add processes on remote machines via SSH. Requires julia
to be installed in the same location on each node, or to be available via a shared file system.
machines
is a vector of machine specifications. Workers are started for each specification.
A machine specification is either a string machine_spec
or a tuple - (machine_spec, count)
.
machine_spec
is a string of the form [user@]host[:port] [bind_addr[:port]]
. user
defaults to current user, port
to the standard ssh port. If [bind_addr[:port]]
is specified, other workers will connect to this worker at the specified bind_addr
and port
.
count
is the number of workers to be launched on the specified host. If specified as :auto
it will launch as many workers as the number of cores on the specific host.
Keyword arguments:
tunnel
: iftrue
then SSH tunneling will be used to connect to the worker from the master process. Default isfalse
.sshflags
: specifies additional ssh options, e.g.sshflags=`-i /home/foo/bar.pem
`max_parallel
: specifies the maximum number of workers connected to in parallel at a host. Defaults to 10.dir
: specifies the working directory on the workers. Defaults to the host's current directory (as found bypwd()
)enable_threaded_blas
: iftrue
then BLAS will run on multiple threads in added processes. Default isfalse
.exename
: name of thejulia
executable. Defaults to"$JULIA_HOME/julia"
or"$JULIA_HOME/julia-debug"
as the case may be.exeflags
: additional flags passed to the worker processes.topology
: Specifies how the workers connect to each other. Sending a message between unconnected workers results in an error.topology=:all_to_all
: All processes are connected to each other. The default.topology=:master_slave
: Only the driver process, i.e.pid
1 connects to the workers. The workers do not connect to each other.topology=:custom
: Thelaunch
method of the cluster manager specifies the connection topology via fieldsident
andconnect_idents
inWorkerConfig
. A worker with a cluster manager identityident
will connect to all workers specified inconnect_idents
.
Environment variables :
If the master process fails to establish a connection with a newly launched worker within 60.0 seconds, the worker treats it as a fatal situation and terminates. This timeout can be controlled via environment variable JULIA_WORKER_TIMEOUT
. The value of JULIA_WORKER_TIMEOUT
on the master process specifies the number of seconds a newly launched worker waits for connection establishment.
addprocs(; kwargs...) -> List of process identifiers
Equivalent to addprocs(Sys.CPU_CORES; kwargs...)
Note that workers do not run a .juliarc.jl
startup script, nor do they synchronize their global state (such as global variables, new method definitions, and loaded modules) with any of the other running processes.
addprocs(np::Integer; restrict=true, kwargs...) -> List of process identifiers
Launches workers using the in-built LocalManager
which only launches workers on the local host. This can be used to take advantage of multiple cores. addprocs(4)
will add 4 processes on the local machine. If restrict
is true
, binding is restricted to 127.0.0.1
. Keyword args dir
, exename
, exeflags
, topology
, and enable_threaded_blas
have the same effect as documented for addprocs(machines)
.
Base.Distributed.nprocs
— Function.nprocs()
Get the number of available processes.
Base.Distributed.nworkers
— Function.nworkers()
Get the number of available worker processes. This is one less than nprocs()
. Equal to nprocs()
if nprocs() == 1
.
Base.Distributed.procs
— Method.procs()
Returns a list of all process identifiers.
Base.Distributed.procs
— Method.procs(pid::Integer)
Returns a list of all process identifiers on the same physical node. Specifically all workers bound to the same ip-address as pid
are returned.
Base.Distributed.workers
— Function.workers()
Returns a list of all worker process identifiers.
Base.Distributed.rmprocs
— Function.rmprocs(pids...; waitfor=typemax(Int))
Removes the specified workers. Note that only process 1 can add or remove workers.
Argument waitfor
specifies how long to wait for the workers to shut down: - If unspecified, rmprocs
will wait until all requested pids
are removed. - An ErrorException
is raised if all workers cannot be terminated before the requested waitfor
seconds. - With a waitfor
value of 0, the call returns immediately with the workers scheduled for removal in a different task. The scheduled Task
object is returned. The user should call wait
on the task before invoking any other parallel calls.
Base.Distributed.interrupt
— Function.interrupt(pids::Integer...)
Interrupt the current executing task on the specified workers. This is equivalent to pressing Ctrl-C on the local machine. If no arguments are given, all workers are interrupted.
interrupt(pids::AbstractVector=workers())
Interrupt the current executing task on the specified workers. This is equivalent to pressing Ctrl-C on the local machine. If no arguments are given, all workers are interrupted.
Base.Distributed.myid
— Function.myid()
Get the id of the current process.
Base.Distributed.pmap
— Function.pmap([::AbstractWorkerPool], f, c...; distributed=true, batch_size=1, on_error=nothing, retry_delays=[]), retry_check=nothing) -> collection
Transform collection c
by applying f
to each element using available workers and tasks.
For multiple collection arguments, apply f
elementwise.
Note that f
must be made available to all worker processes; see Code Availability and Loading Packages for details.
If a worker pool is not specified, all available workers, i.e., the default worker pool is used.
By default, pmap
distributes the computation over all specified workers. To use only the local process and distribute over tasks, specify distributed=false
. This is equivalent to using asyncmap
. For example, pmap(f, c; distributed=false)
is equivalent to asyncmap(f,c; ntasks=()->nworkers())
pmap
can also use a mix of processes and tasks via the batch_size
argument. For batch sizes greater than 1, the collection is processed in multiple batches, each of length batch_size
or less. A batch is sent as a single request to a free worker, where a local asyncmap
processes elements from the batch using multiple concurrent tasks.
Any error stops pmap
from processing the remainder of the collection. To override this behavior you can specify an error handling function via argument on_error
which takes in a single argument, i.e., the exception. The function can stop the processing by rethrowing the error, or, to continue, return any value which is then returned inline with the results to the caller.
Consider the following two examples. The first one returns the exception object inline, the second a 0 in place of any exception:
julia> pmap(x->iseven(x) ? error("foo") : x, 1:4; on_error=identity)
4-element Array{Any,1}:
1
ErrorException("foo")
3
ErrorException("foo")
julia> pmap(x->iseven(x) ? error("foo") : x, 1:4; on_error=ex->0)
4-element Array{Int64,1}:
1
0
3
0
Errors can also be handled by retrying failed computations. Keyword arguments retry_delays
and retry_check
are passed through to retry
as keyword arguments delays
and check
respectively. If batching is specified, and an entire batch fails, all items in the batch are retried.
Note that if both on_error
and retry_delays
are specified, the on_error
hook is called before retrying. If on_error
does not throw (or rethrow) an exception, the element will not be retried.
Example: On errors, retry f
on an element a maximum of 3 times without any delay between retries.
pmap(f, c; retry_delays = zeros(3))
Example: Retry f
only if the exception is not of type InexactError
, with exponentially increasing delays up to 3 times. Return a NaN
in place for all InexactError
occurrences.
pmap(f, c; on_error = e->(isa(e, InexactError) ? NaN : rethrow(e)), retry_delays = ExponentialBackOff(n = 3))
Base.Distributed.RemoteException
— Type.RemoteException(captured)
Exceptions on remote computations are captured and rethrown locally. A RemoteException
wraps the pid
of the worker and a captured exception. A CapturedException
captures the remote exception and a serializable form of the call stack when the exception was raised.
Base.Distributed.Future
— Type.Future(pid::Integer=myid())
Create a Future
on process pid
. The default pid
is the current process.
Base.Distributed.RemoteChannel
— Method.RemoteChannel(pid::Integer=myid())
Make a reference to a Channel{Any}(1)
on process pid
. The default pid
is the current process.
Base.Distributed.RemoteChannel
— Method.RemoteChannel(f::Function, pid::Integer=myid())
Create references to remote channels of a specific size and type. f()
is a function that when executed on pid
must return an implementation of an AbstractChannel
.
For example, RemoteChannel(()->Channel{Int}(10), pid)
, will return a reference to a channel of type Int
and size 10 on pid
.
The default pid
is the current process.
Base.wait
— Function.wait([x])
Block the current task until some event occurs, depending on the type of the argument:
RemoteChannel
: Wait for a value to become available on the specified remote channel.Future
: Wait for a value to become available for the specified future.Channel
: Wait for a value to be appended to the channel.Process
: Wait for a process or process chain to exit. Theexitcode
field of a process can be used to determine success or failure.Task
: Wait for aTask
to finish, returning its result value. If the task fails with an exception, the exception is propagated (re-thrown in the task that calledwait
).RawFD
: Wait for changes on a file descriptor (seepoll_fd
for keyword arguments and return code)
If no argument is passed, the task blocks for an undefined period. A task can only be restarted by an explicit call to schedule
or yieldto
.
Often wait
is called within a while
loop to ensure a waited-for condition is met before proceeding.
Base.fetch
— Method.fetch(x)
Waits and fetches a value from x
depending on the type of x
:
Future
: Wait for and get the value of aFuture
. The fetched value is cached locally. Further calls tofetch
on the same reference return the cached value. If the remote value is an exception, throws aRemoteException
which captures the remote exception and backtrace.RemoteChannel
: Wait for and get the value of a remote reference. Exceptions raised are same as for aFuture
.
Does not remove the item fetched.
Base.Distributed.remotecall
— Method.remotecall(f, id::Integer, args...; kwargs...) -> Future
Call a function f
asynchronously on the given arguments on the specified process. Returns a Future
. Keyword arguments, if any, are passed through to f
.
Base.Distributed.remotecall_wait
— Method.remotecall_wait(f, id::Integer, args...; kwargs...)
Perform a faster wait(remotecall(...))
in one message on the Worker
specified by worker id id
. Keyword arguments, if any, are passed through to f
.
See also wait
and remotecall
.
Base.Distributed.remotecall_fetch
— Method.remotecall_fetch(f, id::Integer, args...; kwargs...)
Perform fetch(remotecall(...))
in one message. Keyword arguments, if any, are passed through to f
. Any remote exceptions are captured in a RemoteException
and thrown.
See also fetch
and remotecall
.
Base.Distributed.remote_do
— Method.remote_do(f, id::Integer, args...; kwargs...) -> nothing
Executes f
on worker id
asynchronously. Unlike remotecall
, it does not store the result of computation, nor is there a way to wait for its completion.
A successful invocation indicates that the request has been accepted for execution on the remote node.
While consecutive remotecall
s to the same worker are serialized in the order they are invoked, the order of executions on the remote worker is undetermined. For example, remote_do(f1, 2); remotecall(f2, 2); remote_do(f3, 2)
will serialize the call to f1
, followed by f2
and f3
in that order. However, it is not guaranteed that f1
is executed before f3
on worker 2.
Any exceptions thrown by f
are printed to STDERR
on the remote worker.
Keyword arguments, if any, are passed through to f
.
Base.put!
— Method.put!(rr::RemoteChannel, args...)
Store a set of values to the RemoteChannel
. If the channel is full, blocks until space is available. Returns its first argument.
Base.put!
— Method.put!(rr::Future, v)
Store a value to a Future
rr
. Future
s are write-once remote references. A put!
on an already set Future
throws an Exception
. All asynchronous remote calls return Future
s and set the value to the return value of the call upon completion.
Base.take!
— Method.take!(rr::RemoteChannel, args...)
Fetch value(s) from a RemoteChannel
rr
, removing the value(s) in the processs.
Base.isready
— Method.isready(rr::RemoteChannel, args...)
Determine whether a RemoteChannel
has a value stored to it. Note that this function can cause race conditions, since by the time you receive its result it may no longer be true. However, it can be safely used on a Future
since they are assigned only once.
Base.isready
— Method.isready(rr::Future)
Determine whether a Future
has a value stored to it.
If the argument Future
is owned by a different node, this call will block to wait for the answer. It is recommended to wait for rr
in a separate task instead or to use a local Channel
as a proxy:
c = Channel(1)
@async put!(c, remotecall_fetch(long_computation, p))
isready(c) # will not block
Base.Distributed.WorkerPool
— Type.WorkerPool(workers::Vector{Int})
Create a WorkerPool from a vector of worker ids.
Base.Distributed.CachingPool
— Type.CachingPool(workers::Vector{Int})
An implementation of an AbstractWorkerPool
. remote
, remotecall_fetch
, pmap
(and other remote calls which execute functions remotely) benefit from caching the serialized/deserialized functions on the worker nodes, especially closures (which may capture large amounts of data).
The remote cache is maintained for the lifetime of the returned CachingPool
object. To clear the cache earlier, use clear!(pool)
.
For global variables, only the bindings are captured in a closure, not the data. let
blocks can be used to capture global data.
For example:
const foo=rand(10^8);
wp=CachingPool(workers())
let foo=foo
pmap(wp, i->sum(foo)+i, 1:100);
end
The above would transfer foo
only once to each worker.
Base.Distributed.default_worker_pool
— Function.default_worker_pool()
WorkerPool
containing idle workers()
- used by remote(f)
and pmap
(by default).
Base.Distributed.clear!
— Method.clear!(pool::CachingPool) -> pool
Removes all cached functions from all participating workers.
Base.Distributed.remote
— Function.remote([::AbstractWorkerPool], f) -> Function
Returns an anonymous function that executes function f
on an available worker using remotecall_fetch
.
Base.Distributed.remotecall
— Method.remotecall(f, pool::AbstractWorkerPool, args...; kwargs...) -> Future
WorkerPool
variant of remotecall(f, pid, ....)
. Waits for and takes a free worker from pool
and performs a remotecall
on it.
Base.Distributed.remotecall_wait
— Method.remotecall_wait(f, pool::AbstractWorkerPool, args...; kwargs...) -> Future
WorkerPool
variant of remotecall_wait(f, pid, ....)
. Waits for and takes a free worker from pool
and performs a remotecall_wait
on it.
Base.Distributed.remotecall_fetch
— Method.remotecall_fetch(f, pool::AbstractWorkerPool, args...; kwargs...) -> result
WorkerPool
variant of remotecall_fetch(f, pid, ....)
. Waits for and takes a free worker from pool
and performs a remotecall_fetch
on it.
Base.Distributed.remote_do
— Method.remote_do(f, pool::AbstractWorkerPool, args...; kwargs...) -> nothing
WorkerPool
variant of remote_do(f, pid, ....)
. Waits for and takes a free worker from pool
and performs a remote_do
on it.
Base.timedwait
— Function.timedwait(testcb::Function, secs::Float64; pollint::Float64=0.1)
Waits until testcb
returns true
or for secs
seconds, whichever is earlier. testcb
is polled every pollint
seconds.
Base.Distributed.@spawn
— Macro.@spawn
Creates a closure around an expression and runs it on an automatically-chosen process, returning a Future
to the result.
Base.Distributed.@spawnat
— Macro.@spawnat
Accepts two arguments, p
and an expression. A closure is created around the expression and run asynchronously on process p
. Returns a Future
to the result.
Base.Distributed.@fetch
— Macro.Base.Distributed.@fetchfrom
— Macro.Base.@async
— Macro.@async
Like @schedule
, @async
wraps an expression in a Task
and adds it to the local machine's scheduler queue. Additionally it adds the task to the set of items that the nearest enclosing @sync
waits for.
Base.@sync
— Macro.@sync
Wait until all dynamically-enclosed uses of @async
, @spawn
, @spawnat
and @parallel
are complete. All exceptions thrown by enclosed async operations are collected and thrown as a CompositeException
.
Base.Distributed.@parallel
— Macro.@parallel
A parallel for loop of the form :
@parallel [reducer] for var = range
body
end
The specified range is partitioned and locally executed across all workers. In case an optional reducer function is specified, @parallel
performs local reductions on each worker with a final reduction on the calling process.
Note that without a reducer function, @parallel
executes asynchronously, i.e. it spawns independent tasks on all available workers and returns immediately without waiting for completion. To wait for completion, prefix the call with @sync
, like :
@sync @parallel for var = range
body
end
Base.Distributed.@everywhere
— Macro.@everywhere expr
Execute an expression under Main
everywhere. Equivalent to calling eval(Main, expr)
on all processes. Errors on any of the processes are collected into a CompositeException
and thrown. For example :
@everywhere bar=1
will define Main.bar
on all processes.
Unlike @spawn
and @spawnat
, @everywhere
does not capture any local variables. Prefixing @everywhere
with @eval
allows us to broadcast local variables using interpolation :
foo = 1
@eval @everywhere bar=$foo
The expression is evaluated under Main
irrespective of where @everywhere
is called from. For example :
module FooBar
foo() = @everywhere bar()=myid()
end
FooBar.foo()
will result in Main.bar
being defined on all processes and not FooBar.bar
.
Base.Distributed.clear!
— Method.clear!(syms, pids=workers(); mod=Main)
Clears global bindings in modules by initializing them to nothing
. syms
should be of type Symbol
or a collection of Symbol
s . pids
and mod
identify the processes and the module in which global variables are to be reinitialized. Only those names found to be defined under mod
are cleared.
An exception is raised if a global constant is requested to be cleared.
Base.Distributed.remoteref_id
— Function.Base.remoteref_id(r::AbstractRemoteRef) -> RRID
Future
s and RemoteChannel
s are identified by fields:
where
- refers to the node where the underlying object/storage referred to by the reference actually exists.whence
- refers to the node the remote reference was created from. Note that this is different from the node where the underlying object referred to actually exists. For example callingRemoteChannel(2)
from the master process would result in awhere
value of 2 and awhence
value of 1.id
is unique across all references created from the worker specified bywhence
.
Taken together, whence
and id
uniquely identify a reference across all workers.
Base.remoteref_id
is a low-level API which returns a Base.RRID
object that wraps whence
and id
values of a remote reference.
Base.Distributed.channel_from_id
— Function.Base.channel_from_id(id) -> c
A low-level API which returns the backing AbstractChannel
for an id
returned by remoteref_id
. The call is valid only on the node where the backing channel exists.
Base.Distributed.worker_id_from_socket
— Function.Base.worker_id_from_socket(s) -> pid
A low-level API which given a IO
connection or a Worker
, returns the pid
of the worker it is connected to. This is useful when writing custom serialize
methods for a type, which optimizes the data written out depending on the receiving process id.
Base.Distributed.cluster_cookie
— Method.Base.cluster_cookie() -> cookie
Returns the cluster cookie.
Base.Distributed.cluster_cookie
— Method.Base.cluster_cookie(cookie) -> cookie
Sets the passed cookie as the cluster cookie, then returns it.
Shared Arrays
Base.SharedArray
— Type.SharedArray{T}(dims::NTuple; init=false, pids=Int[])
SharedArray{T,N}(...)
Construct a SharedArray
of a bits type T
and size dims
across the processes specified by pids
- all of which have to be on the same host. If N
is specified by calling SharedArray{T,N}(dims)
, then N
must match the length of dims
.
If pids
is left unspecified, the shared array will be mapped across all processes on the current host, including the master. But, localindexes
and indexpids
will only refer to worker processes. This facilitates work distribution code to use workers for actual computation with the master process acting as a driver.
If an init
function of the type initfn(S::SharedArray)
is specified, it is called on all the participating workers.
The shared array is valid as long as a reference to the SharedArray
object exists on the node which created the mapping.
SharedArray{T}(filename::AbstractString, dims::NTuple, [offset=0]; mode=nothing, init=false, pids=Int[])
SharedArray{T,N}(...)
Construct a SharedArray
backed by the file filename
, with element type T
(must be a bits type) and size dims
, across the processes specified by pids
- all of which have to be on the same host. This file is mmapped into the host memory, with the following consequences:
The array data must be represented in binary format (e.g., an ASCII format like CSV cannot be supported)
Any changes you make to the array values (e.g.,
A[3] = 0
) will also change the values on disk
If pids
is left unspecified, the shared array will be mapped across all processes on the current host, including the master. But, localindexes
and indexpids
will only refer to worker processes. This facilitates work distribution code to use workers for actual computation with the master process acting as a driver.
mode
must be one of "r"
, "r+"
, "w+"
, or "a+"
, and defaults to "r+"
if the file specified by filename
already exists, or "w+"
if not. If an init
function of the type initfn(S::SharedArray)
is specified, it is called on all the participating workers. You cannot specify an init
function if the file is not writable.
offset
allows you to skip the specified number of bytes at the beginning of the file.
Base.Distributed.procs
— Method.procs(S::SharedArray)
Get the vector of processes mapping the shared array.
Base.sdata
— Function.sdata(S::SharedArray)
Returns the actual Array
object backing S
.
Base.indexpids
— Function.indexpids(S::SharedArray)
Returns the current worker's index in the list of workers mapping the SharedArray
(i.e. in the same list returned by procs(S)
), or 0 if the SharedArray
is not mapped locally.
Base.localindexes
— Function.localindexes(S::SharedArray)
Returns a range describing the "default" indexes to be handled by the current process. This range should be interpreted in the sense of linear indexing, i.e., as a sub-range of 1:length(S)
. In multi-process contexts, returns an empty range in the parent process (or any process for which indexpids
returns 0).
It's worth emphasizing that localindexes
exists purely as a convenience, and you can partition work on the array among workers any way you wish. For a SharedArray
, all indexes should be equally fast for each worker process.
Multi-Threading
This experimental interface supports Julia's multi-threading capabilities. Types and functions described here might (and likely will) change in the future.
Base.Threads.threadid
— Function.Threads.threadid()
Get the ID number of the current thread of execution. The master thread has ID 1
.
Base.Threads.nthreads
— Function.Threads.nthreads()
Get the number of threads available to the Julia process. This is the inclusive upper bound on threadid()
.
Base.Threads.@threads
— Macro.Threads.@threads
A macro to parallelize a for-loop to run with multiple threads. This spawns nthreads()
number of threads, splits the iteration space amongst them, and iterates in parallel. A barrier is placed at the end of the loop which waits for all the threads to finish execution, and the loop returns.
Base.Threads.Atomic
— Type.Threads.Atomic{T}
Holds a reference to an object of type T
, ensuring that it is only accessed atomically, i.e. in a thread-safe manner.
Only certain "simple" types can be used atomically, namely the primitive integer and float-point types. These are Int8
...Int128
, UInt8
...UInt128
, and Float16
...Float64
.
New atomic objects can be created from a non-atomic values; if none is specified, the atomic object is initialized with zero.
Atomic objects can be accessed using the []
notation:
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> x[] = 1
1
julia> x[]
1
Atomic operations use an atomic_
prefix, such as atomic_add!
, atomic_xchg!
, etc.
Base.Threads.atomic_cas!
— Function.Threads.atomic_cas!{T}(x::Atomic{T}, cmp::T, newval::T)
Atomically compare-and-set x
Atomically compares the value in x
with cmp
. If equal, write newval
to x
. Otherwise, leaves x
unmodified. Returns the old value in x
. By comparing the returned value to cmp
(via ===
) one knows whether x
was modified and now holds the new value newval
.
For further details, see LLVM's cmpxchg
instruction.
This function can be used to implement transactional semantics. Before the transaction, one records the value in x
. After the transaction, the new value is stored only if x
has not been modified in the mean time.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_cas!(x, 4, 2);
julia> x
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_cas!(x, 3, 2);
julia> x
Base.Threads.Atomic{Int64}(2)
Base.Threads.atomic_xchg!
— Function.Threads.atomic_xchg!{T}(x::Atomic{T}, newval::T)
Atomically exchange the value in x
Atomically exchanges the value in x
with newval
. Returns the old value.
For further details, see LLVM's atomicrmw xchg
instruction.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_xchg!(x, 2)
3
julia> x[]
2
Base.Threads.atomic_add!
— Function.Threads.atomic_add!{T}(x::Atomic{T}, val::T)
Atomically add val
to x
Performs x[] += val
atomically. Returns the old value.
For further details, see LLVM's atomicrmw add
instruction.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_add!(x, 2)
3
julia> x[]
5
Base.Threads.atomic_sub!
— Function.Threads.atomic_sub!{T}(x::Atomic{T}, val::T)
Atomically subtract val
from x
Performs x[] -= val
atomically. Returns the old value.
For further details, see LLVM's atomicrmw sub
instruction.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_sub!(x, 2)
3
julia> x[]
1
Base.Threads.atomic_and!
— Function.Threads.atomic_and!{T}(x::Atomic{T}, val::T)
Atomically bitwise-and x
with val
Performs x[] &= val
atomically. Returns the old value.
For further details, see LLVM's atomicrmw and
instruction.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_and!(x, 2)
3
julia> x[]
2
Base.Threads.atomic_nand!
— Function.Threads.atomic_nand!{T}(x::Atomic{T}, val::T)
Atomically bitwise-nand (not-and) x
with val
Performs x[] = ~(x[] & val)
atomically. Returns the old value.
For further details, see LLVM's atomicrmw nand
instruction.
julia> x = Threads.Atomic{Int}(3)
Base.Threads.Atomic{Int64}(3)
julia> Threads.atomic_nand!(x, 2)
3
julia> x[]
-3
Base.Threads.atomic_or!
— Function.Threads.atomic_or!{T}(x::Atomic{T}, val::T)
Atomically bitwise-or x
with val
Performs x[] |= val
atomically. Returns the old value.
For further details, see LLVM's atomicrmw or
instruction.
julia> x = Threads.Atomic{Int}(5)
Base.Threads.Atomic{Int64}(5)
julia> Threads.atomic_or!(x, 7)
5
julia> x[]
7
Base.Threads.atomic_xor!
— Function.Threads.atomic_xor!{T}(x::Atomic{T}, val::T)
Atomically bitwise-xor (exclusive-or) x
with val
Performs x[] $= val
atomically. Returns the old value.
For further details, see LLVM's atomicrmw xor
instruction.
julia> x = Threads.Atomic{Int}(5)
Base.Threads.Atomic{Int64}(5)
julia> Threads.atomic_xor!(x, 7)
5
julia> x[]
2
Base.Threads.atomic_max!
— Function.Threads.atomic_max!{T}(x::Atomic{T}, val::T)
Atomically store the maximum of x
and val
in x
Performs x[] = max(x[], val)
atomically. Returns the old value.
For further details, see LLVM's atomicrmw max
instruction.
julia> x = Threads.Atomic{Int}(5)
Base.Threads.Atomic{Int64}(5)
julia> Threads.atomic_max!(x, 7)
5
julia> x[]
7
Base.Threads.atomic_min!
— Function.Threads.atomic_min!{T}(x::Atomic{T}, val::T)
Atomically store the minimum of x
and val
in x
Performs x[] = min(x[], val)
atomically. Returns the old value.
For further details, see LLVM's atomicrmw min
instruction.
julia> x = Threads.Atomic{Int}(7)
Base.Threads.Atomic{Int64}(7)
julia> Threads.atomic_min!(x, 5)
7
julia> x[]
5
Base.Threads.atomic_fence
— Function.Threads.atomic_fence()
Insert a sequential-consistency memory fence
Inserts a memory fence with sequentially-consistent ordering semantics. There are algorithms where this is needed, i.e. where an acquire/release ordering is insufficient.
This is likely a very expensive operation. Given that all other atomic operations in Julia already have acquire/release semantics, explicit fences should not be necessary in most cases.
For further details, see LLVM's fence
instruction.
ccall using a threadpool (Experimental)
Base.@threadcall
— Macro.@threadcall((cfunc, clib), rettype, (argtypes...), argvals...)
The @threadcall
macro is called in the same way as ccall
but does the work in a different thread. This is useful when you want to call a blocking C function without causing the main julia
thread to become blocked. Concurrency is limited by size of the libuv thread pool, which defaults to 4 threads but can be increased by setting the UV_THREADPOOL_SIZE
environment variable and restarting the julia
process.
Note that the called function should never call back into Julia.
Synchronization Primitives
Base.Threads.AbstractLock
— Type.AbstractLock
Abstract supertype describing types that implement the thread-safe synchronization primitives: lock
, trylock
, unlock
, and islocked
Base.lock
— Function.lock(the_lock)
Acquires the lock when it becomes available. If the lock is already locked by a different task/thread, it waits for it to become available.
Each lock
must be matched by an unlock
.
Base.unlock
— Function.unlock(the_lock)
Releases ownership of the lock.
If this is a recursive lock which has been acquired before, it just decrements an internal counter and returns immediately.
Base.trylock
— Function.trylock(the_lock) -> Success (Boolean)
Acquires the lock if it is available, returning true
if successful. If the lock is already locked by a different task/thread, returns false
.
Each successful trylock
must be matched by an unlock
.
Base.islocked
— Function.islocked(the_lock) -> Status (Boolean)
Check whether the lock is held by any task/thread. This should not be used for synchronization (see instead trylock
).
Base.ReentrantLock
— Type.ReentrantLock()
Creates a reentrant lock for synchronizing Tasks. The same task can acquire the lock as many times as required. Each lock
must be matched with an unlock
.
This lock is NOT threadsafe. See Threads.Mutex
for a threadsafe lock.
Base.Threads.Mutex
— Type.Mutex()
These are standard system mutexes for locking critical sections of logic.
On Windows, this is a critical section object, on pthreads, this is a pthread_mutex_t
.
See also SpinLock for a lighter-weight lock.
Base.Threads.SpinLock
— Type.SpinLock()
Creates a non-reentrant lock. Recursive use will result in a deadlock. Each lock
must be matched with an unlock
.
Test-and-test-and-set spin locks are quickest up to about 30ish contending threads. If you have more contention than that, perhaps a lock is the wrong way to synchronize.
See also RecursiveSpinLock for a version that permits recursion.
See also Mutex for a more efficient version on one core or if the lock may be held for a considerable length of time.
Base.Threads.RecursiveSpinLock
— Type.RecursiveSpinLock()
Creates a reentrant lock. The same thread can acquire the lock as many times as required. Each lock
must be matched with an unlock
.
See also SpinLock for a slightly faster version.
See also Mutex for a more efficient version on one core or if the lock may be held for a considerable length of time.
Base.Semaphore
— Type.Semaphore(sem_size)
Creates a counting semaphore that allows at most sem_size
acquires to be in use at any time. Each acquire must be mached with a release.
This construct is NOT threadsafe.
Base.acquire
— Function.acquire(s::Semaphore)
Wait for one of the sem_size
permits to be available, blocking until one can be acquired.
Base.release
— Function.release(s::Semaphore)
Return one permit to the pool, possibly allowing another task to acquire it and resume execution.
Cluster Manager Interface
This interface provides a mechanism to launch and manage Julia workers on different cluster environments. There are two types of managers present in Base: LocalManager
, for launching additional workers on the same host, and SSHManager
, for launching on remote hosts via ssh
. TCP/IP sockets are used to connect and transport messages between processes. It is possible for Cluster Managers to provide a different transport.
Base.Distributed.launch
— Function.launch(manager::ClusterManager, params::Dict, launched::Array, launch_ntfy::Condition)
Implemented by cluster managers. For every Julia worker launched by this function, it should append a WorkerConfig
entry to launched
and notify launch_ntfy
. The function MUST exit once all workers, requested by manager
have been launched. params
is a dictionary of all keyword arguments addprocs
was called with.
Base.Distributed.manage
— Function.manage(manager::ClusterManager, id::Integer, config::WorkerConfig. op::Symbol)
Implemented by cluster managers. It is called on the master process, during a worker's lifetime, with appropriate op
values:
with
:register
/:deregister
when a worker is added / removed from the Julia worker pool.with
:interrupt
wheninterrupt(workers)
is called. TheClusterManager
should signal the appropriate worker with an interrupt signal.with
:finalize
for cleanup purposes.
Base.kill
— Method.kill(manager::ClusterManager, pid::Int, config::WorkerConfig)
Implemented by cluster managers. It is called on the master process, by rmprocs
. It should cause the remote worker specified by pid
to exit. Base.kill(manager::ClusterManager.....)
executes a remote exit()
on pid
.
Base.Distributed.init_worker
— Function.init_worker(cookie::AbstractString, manager::ClusterManager=DefaultClusterManager())
Called by cluster managers implementing custom transports. It initializes a newly launched process as a worker. Command line argument --worker
has the effect of initializing a process as a worker using TCP/IP sockets for transport. cookie
is a cluster_cookie
.
Base.connect
— Method.connect(manager::ClusterManager, pid::Int, config::WorkerConfig) -> (instrm::IO, outstrm::IO)
Implemented by cluster managers using custom transports. It should establish a logical connection to worker with id pid
, specified by config
and return a pair of IO
objects. Messages from pid
to current process will be read off instrm
, while messages to be sent to pid
will be written to outstrm
. The custom transport implementation must ensure that messages are delivered and received completely and in order. Base.connect(manager::ClusterManager.....)
sets up TCP/IP socket connections in-between workers.
Base.Distributed.process_messages
— Function.Base.process_messages(r_stream::IO, w_stream::IO, incoming::Bool=true)
Called by cluster managers using custom transports. It should be called when the custom transport implementation receives the first message from a remote worker. The custom transport must manage a logical connection to the remote worker and provide two IO
objects, one for incoming messages and the other for messages addressed to the remote worker. If incoming
is true
, the remote peer initiated the connection. Whichever of the pair initiates the connection sends the cluster cookie and its Julia version number to perform the authentication handshake.
See also cluster_cookie
.