Interfaces
A lot of the power and extensibility in Julia comes from a collection of informal interfaces. By extending a few specific methods to work for a custom type, objects of that type not only receive those functionalities, but they are also able to be used in other methods that are written to generically build upon those behaviors.
Iteration
Required methods | Brief description | |
---|---|---|
start(iter) | Returns the initial iteration state | |
next(iter, state) | Returns the current item and the next state | |
done(iter, state) | Tests if there are any items remaining | |
Important optional methods | Default definition | Brief description |
iteratorsize(IterType) | HasLength() | One of HasLength() , HasShape() , IsInfinite() , or SizeUnknown() as appropriate |
iteratoreltype(IterType) | HasEltype() | Either EltypeUnknown() or HasEltype() as appropriate |
eltype(IterType) | Any | The type the items returned by next() |
length(iter) | (undefined) | The number of items, if known |
size(iter, [dim...]) | (undefined) | The number of items in each dimension, if known |
Value returned by iteratorsize(IterType) | Required Methods |
---|---|
HasLength() | length(iter) |
HasShape() | length(iter) and size(iter, [dim...]) |
IsInfinite() | (none) |
SizeUnknown() | (none) |
Value returned by iteratoreltype(IterType) | Required Methods |
---|---|
HasEltype() | eltype(IterType) |
EltypeUnknown() | (none) |
Sequential iteration is implemented by the methods start()
, done()
, and next()
. Instead of mutating objects as they are iterated over, Julia provides these three methods to keep track of the iteration state externally from the object. The start(iter)
method returns the initial state for the iterable object iter
. That state gets passed along to done(iter, state)
, which tests if there are any elements remaining, and next(iter, state)
, which returns a tuple containing the current element and an updated state
. The state
object can be anything, and is generally considered to be an implementation detail private to the iterable object.
Any object defines these three methods is iterable and can be used in the many functions that rely upon iteration. It can also be used directly in a for
loop since the syntax:
for i in iter # or "for i = iter"
# body
end
is translated into:
state = start(iter)
while !done(iter, state)
(i, state) = next(iter, state)
# body
end
A simple example is an iterable sequence of square numbers with a defined length:
julia> struct Squares
count::Int
end
julia> Base.start(::Squares) = 1
julia> Base.next(S::Squares, state) = (state*state, state+1)
julia> Base.done(S::Squares, state) = state > S.count
julia> Base.eltype(::Type{Squares}) = Int # Note that this is defined for the type
julia> Base.length(S::Squares) = S.count
With only start
, next
, and done
definitions, the Squares
type is already pretty powerful. We can iterate over all the elements:
julia> for i in Squares(7)
println(i)
end
1
4
9
16
25
36
49
We can use many of the builtin methods that work with iterables, like in()
, mean()
and std()
:
julia> 25 in Squares(10)
true
julia> mean(Squares(100))
3383.5
julia> std(Squares(100))
3024.355854282583
There are a few more methods we can extend to give Julia more information about this iterable collection. We know that the elements in a Squares
sequence will always be Int
. By extending the eltype()
method, we can give that information to Julia and help it make more specialized code in the more complicated methods. We also know the number of elements in our sequence, so we can extend length()
, too.
Now, when we ask Julia to collect()
all the elements into an array it can preallocate a Vector{Int}
of the right size instead of blindly push!
ing each element into a Vector{Any}
:
julia> collect(Squares(10))' # transposed to save space
1×10 RowVector{Int64,Array{Int64,1}}:
1 4 9 16 25 36 49 64 81 100
While we can rely upon generic implementations, we can also extend specific methods where we know there is a simpler algorithm. For example, there's a formula to compute the sum of squares, so we can override the generic iterative version with a more performant solution:
julia> Base.sum(S::Squares) = (n = S.count; return n*(n+1)*(2n+1)÷6)
julia> sum(Squares(1803))
1955361914
This is a very common pattern throughout the Julia standard library: a small set of required methods define an informal interface that enable many fancier behaviors. In some cases, types will want to additionally specialize those extra behaviors when they know a more efficient algorithm can be used in their specific case.
Indexing
Methods to implement | Brief description |
---|---|
getindex(X, i) | X[i] , indexed element access |
setindex!(X, v, i) | X[i] = v , indexed assignment |
endof(X) | The last index, used in X[end] |
For the Squares
iterable above, we can easily compute the i
th element of the sequence by squaring it. We can expose this as an indexing expression S[i]
. To opt into this behavior, Squares
simply needs to define getindex()
:
julia> function Base.getindex(S::Squares, i::Int)
1 <= i <= S.count || throw(BoundsError(S, i))
return i*i
end
julia> Squares(100)[23]
529
Additionally, to support the syntax S[end]
, we must define endof()
to specify the last valid index:
julia> Base.endof(S::Squares) = length(S)
julia> Squares(23)[end]
529
Note, though, that the above only defines getindex()
with one integer index. Indexing with anything other than an Int
will throw a MethodError
saying that there was no matching method. In order to support indexing with ranges or vectors of Int
s, separate methods must be written:
julia> Base.getindex(S::Squares, i::Number) = S[convert(Int, i)]
julia> Base.getindex(S::Squares, I) = [S[i] for i in I]
julia> Squares(10)[[3,4.,5]]
3-element Array{Int64,1}:
9
16
25
While this is starting to support more of the indexing operations supported by some of the builtin types, there's still quite a number of behaviors missing. This Squares
sequence is starting to look more and more like a vector as we've added behaviors to it. Instead of defining all these behaviors ourselves, we can officially define it as a subtype of an AbstractArray
.
Abstract Arrays
Methods to implement | Brief description | |
---|---|---|
size(A) | Returns a tuple containing the dimensions of A | |
getindex(A, i::Int) | (if IndexLinear ) Linear scalar indexing | |
getindex(A, I::Vararg{Int, N}) | (if IndexCartesian , where N = ndims(A) ) N-dimensional scalar indexing | |
setindex!(A, v, i::Int) | (if IndexLinear ) Scalar indexed assignment | |
setindex!(A, v, I::Vararg{Int, N}) | (if IndexCartesian , where N = ndims(A) ) N-dimensional scalar indexed assignment | |
Optional methods | Default definition | Brief description |
IndexStyle(::Type) | IndexCartesian() | Returns either IndexLinear() or IndexCartesian() . See the description below. |
getindex(A, I...) | defined in terms of scalar getindex() | Multidimensional and nonscalar indexing |
setindex!(A, I...) | defined in terms of scalar setindex!() | Multidimensional and nonscalar indexed assignment |
start() /next() /done() | defined in terms of scalar getindex() | Iteration |
length(A) | prod(size(A)) | Number of elements |
similar(A) | similar(A, eltype(A), size(A)) | Return a mutable array with the same shape and element type |
similar(A, ::Type{S}) | similar(A, S, size(A)) | Return a mutable array with the same shape and the specified element type |
similar(A, dims::NTuple{Int}) | similar(A, eltype(A), dims) | Return a mutable array with the same element type and size dims |
similar(A, ::Type{S}, dims::NTuple{Int}) | Array{S}(dims) | Return a mutable array with the specified element type and size |
Non-traditional indices | Default definition | Brief description |
indices(A) | map(OneTo, size(A)) | Return the AbstractUnitRange of valid indices |
Base.similar(A, ::Type{S}, inds::NTuple{Ind}) | similar(A, S, Base.to_shape(inds)) | Return a mutable array with the specified indices inds (see below) |
Base.similar(T::Union{Type,Function}, inds) | T(Base.to_shape(inds)) | Return an array similar to T with the specified indices inds (see below) |
If a type is defined as a subtype of AbstractArray
, it inherits a very large set of rich behaviors including iteration and multidimensional indexing built on top of single-element access. See the arrays manual page and standard library section for more supported methods.
A key part in defining an AbstractArray
subtype is IndexStyle
. Since indexing is such an important part of an array and often occurs in hot loops, it's important to make both indexing and indexed assignment as efficient as possible. Array data structures are typically defined in one of two ways: either it most efficiently accesses its elements using just one index (linear indexing) or it intrinsically accesses the elements with indices specified for every dimension. These two modalities are identified by Julia as IndexLinear()
and IndexCartesian()
. Converting a linear index to multiple indexing subscripts is typically very expensive, so this provides a traits-based mechanism to enable efficient generic code for all array types.
This distinction determines which scalar indexing methods the type must define. IndexLinear()
arrays are simple: just define getindex(A::ArrayType, i::Int)
. When the array is subsequently indexed with a multidimensional set of indices, the fallback getindex(A::AbstractArray, I...)()
efficiently converts the indices into one linear index and then calls the above method. IndexCartesian()
arrays, on the other hand, require methods to be defined for each supported dimensionality with ndims(A)
Int
indices. For example, the built-in SparseMatrixCSC
type only supports two dimensions, so it just defines getindex(A::SparseMatrixCSC, i::Int, j::Int)
. The same holds for setindex!()
.
Returning to the sequence of squares from above, we could instead define it as a subtype of an AbstractArray{Int, 1}
:
julia> struct SquaresVector <: AbstractArray{Int, 1}
count::Int
end
julia> Base.size(S::SquaresVector) = (S.count,)
julia> Base.IndexStyle(::Type{<:SquaresVector}) = IndexLinear()
julia> Base.getindex(S::SquaresVector, i::Int) = i*i
Note that it's very important to specify the two parameters of the AbstractArray
; the first defines the eltype()
, and the second defines the ndims()
. That supertype and those three methods are all it takes for SquaresVector
to be an iterable, indexable, and completely functional array:
julia> s = SquaresVector(7)
7-element SquaresVector:
1
4
9
16
25
36
49
julia> s[s .> 20]
3-element Array{Int64,1}:
25
36
49
julia> s \ [1 2; 3 4; 5 6; 7 8; 9 10; 11 12; 13 14]
1×2 Array{Float64,2}:
0.305389 0.335329
julia> s ⋅ s # dot(s, s)
4676
As a more complicated example, let's define our own toy N-dimensional sparse-like array type built on top of Dict
:
julia> struct SparseArray{T,N} <: AbstractArray{T,N}
data::Dict{NTuple{N,Int}, T}
dims::NTuple{N,Int}
end
julia> SparseArray{T}(::Type{T}, dims::Int...) = SparseArray(T, dims);
julia> SparseArray{T,N}(::Type{T}, dims::NTuple{N,Int}) = SparseArray{T,N}(Dict{NTuple{N,Int}, T}(), dims);
julia> Base.size(A::SparseArray) = A.dims
julia> Base.similar(A::SparseArray, ::Type{T}, dims::Dims) where {T} = SparseArray(T, dims)
julia> Base.getindex(A::SparseArray{T,N}, I::Vararg{Int,N}) where {T,N} = get(A.data, I, zero(T))
julia> Base.setindex!(A::SparseArray{T,N}, v, I::Vararg{Int,N}) where {T,N} = (A.data[I] = v)
Notice that this is an IndexCartesian
array, so we must manually define getindex()
and setindex!()
at the dimensionality of the array. Unlike the SquaresVector
, we are able to define setindex!()
, and so we can mutate the array:
julia> A = SparseArray(Float64, 3, 3)
3×3 SparseArray{Float64,2}:
0.0 0.0 0.0
0.0 0.0 0.0
0.0 0.0 0.0
julia> fill!(A, 2)
3×3 SparseArray{Float64,2}:
2.0 2.0 2.0
2.0 2.0 2.0
2.0 2.0 2.0
julia> A[:] = 1:length(A); A
3×3 SparseArray{Float64,2}:
1.0 4.0 7.0
2.0 5.0 8.0
3.0 6.0 9.0
The result of indexing an AbstractArray
can itself be an array (for instance when indexing by a Range
). The AbstractArray
fallback methods use similar()
to allocate an Array
of the appropriate size and element type, which is filled in using the basic indexing method described above. However, when implementing an array wrapper you often want the result to be wrapped as well:
julia> A[1:2,:]
2×3 SparseArray{Float64,2}:
1.0 4.0 7.0
2.0 5.0 8.0
In this example it is accomplished by defining Base.similar{T}(A::SparseArray, ::Type{T}, dims::Dims)
to create the appropriate wrapped array. (Note that while similar
supports 1- and 2-argument forms, in most case you only need to specialize the 3-argument form.) For this to work it's important that SparseArray
is mutable (supports setindex!
). Defining similar()
, getindex()
and setindex!()
for SparseArray
also makes it possible to copy()
the array:
julia> copy(A)
3×3 SparseArray{Float64,2}:
1.0 4.0 7.0
2.0 5.0 8.0
3.0 6.0 9.0
In addition to all the iterable and indexable methods from above, these types can also interact with each other and use most of the methods defined in the standard library for AbstractArrays
:
julia> A[SquaresVector(3)]
3-element SparseArray{Float64,1}:
1.0
4.0
9.0
julia> dot(A[:,1],A[:,2])
32.0
If you are defining an array type that allows non-traditional indexing (indices that start at something other than 1), you should specialize indices
. You should also specialize similar
so that the dims
argument (ordinarily a Dims
size-tuple) can accept AbstractUnitRange
objects, perhaps range-types Ind
of your own design. For more information, see Arrays with custom indices.